Double Chocolate Chip Sourdough Bagels Recipe
Introduction
These double chocolate chip sourdough bagels are a delightful twist on a classic favorite. Soft, slightly tangy sourdough dough combines with rich cocoa and melty chocolate chips for a treat that’s perfect for breakfast or a snack.

Ingredients
- 1 1/4 cup self-rising flour (see below for homemade self-rising flour)***
- 1/4 cup unsweetened cocoa powder
- Optional: 2 tbsp granulated sugar
- 3/4 cup Greek yogurt, plain or vanilla
- 3/4 cup sourdough discard or unfed starter (can substitute with another 1/2 cup Greek yogurt)
- 1 cup chocolate chips of choice, divided
- 1 egg + 1 tbsp milk, for egg wash
- 1 1/4 cup all-purpose flour
- 1 1/2 tsp baking powder
- 1/4 tsp baking soda
- 1/4 tsp salt
Instructions
- Step 1: Preheat the oven to 375°F. Line a baking sheet with parchment paper and set aside.
- Step 2: In a large bowl, combine the self-rising flour, cocoa powder, sugar (if using), Greek yogurt, and sourdough discard. Mix until well combined. The dough will be slightly sticky—this is expected.
- Step 3: Transfer the dough onto a generously floured surface. Sprinkle more flour on top, then knead a few times with your hands until the dough becomes smooth. If it remains too sticky, add flour one tablespoon at a time and continue kneading until moldable.
- Step 4: Flatten the dough slightly with your hands. Pour 1/2 cup of chocolate chips into the center. Fold the edges over to encase the chips, then knead a few more times until the chocolate chips are evenly distributed.
- Step 5: Divide the dough into 8 equal pieces.
- Step 6: Roll each piece into a rope and connect the ends to form a bagel shape. Pinch the seam to seal, and place the bagels on the prepared baking sheet.
- Step 7: Brush the tops of each bagel with the egg wash (egg beaten with milk), then sprinkle the remaining chocolate chips on top.
- Step 8: Bake in the preheated oven for 20–22 minutes, until set and slightly firm to the touch.
- Step 9: Serve the bagels warm with cream cheese or butter.
- Step 10: Enjoy your homemade double chocolate chip sourdough bagels!
Tips & Variations
- For a sweeter dough, feel free to increase the sugar to 3 tablespoons or use vanilla-flavored Greek yogurt.
- Substitute sourdough discard with additional Greek yogurt if you don’t have starter on hand.
- Try adding chopped nuts or dried fruit along with the chocolate chips for extra texture and flavor.
- Ensure your surface is well-floured during kneading to prevent sticking but avoid adding too much flour to keep the bagels tender.
Storage
Store leftover bagels in an airtight container or resealable bag at room temperature for up to 2 days. For longer storage, freeze bagels individually wrapped in plastic wrap and foil for up to 3 months. Reheat frozen bagels by toasting or warming in the oven until heated through.
How to Serve

Serve this delicious recipe with your favorite sides.
FAQs
Can I use regular flour instead of self-rising flour?
Yes. To make 1 1/4 cups of self-rising flour, combine 1 1/4 cups all-purpose flour with 1 1/2 teaspoons baking powder and 1/4 teaspoon salt.
What is sourdough discard?
Sourdough discard is the portion of sourdough starter you remove during feeding. It’s often unused and can be incorporated into recipes like these bagels to add flavor without extra fermentation time.
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Double Chocolate Chip Sourdough Bagels Recipe
- Total Time: 37 minutes
- Yield: 8 bagels 1x
Description
Delight in these rich and indulgent Double Chocolate Chip Sourdough Bagels, combining the tangy goodness of sourdough with the deep flavor of cocoa and melty chocolate chips. Soft yet chewy, these bagels are perfect for breakfast or a decadent snack, finished with a shiny egg wash and extra chocolate chips for a sweet finish.
Ingredients
Dry Ingredients
- 1 1/4 cup self-rising flour (see below for homemade self-rising flour)
- 1/4 cup unsweetened cocoa powder
- Optional: 2 tbsp granulated sugar
- 1 1/4 cup all-purpose flour
- 1 1/2 tsp baking powder
- 1/4 tsp baking soda
- 1/4 tsp salt
- 1 cup chocolate chips, divided
Wet Ingredients
- 3/4 cup Greek yogurt, plain or vanilla
- 3/4 cup sourdough discard or unfed starter (or substitute with another 1/2 cup Greek yogurt)
- 1 egg + 1 tbsp milk, for egg wash
Instructions
- Preheat Oven: Preheat your oven to 375°F (190°C). Line a baking sheet with parchment paper and set aside to prepare the bagels for baking.
- Mix Dough: In a large bowl, combine self-rising flour, cocoa powder, optional sugar, Greek yogurt, and sourdough discard. Mix well until fully combined, forming a sticky dough.
- Knead Dough: Transfer the dough to a generously floured surface. Sprinkle more flour on top and knead a few times until the dough smooths out. If still sticky, gradually add flour by 1 tablespoon until moldable but still slightly soft.
- Add Chocolate Chips: Flatten the dough slightly and pour 1/2 cup of the chocolate chips into the center. Fold edges over to fully encase the chips and knead gently to distribute chips evenly throughout the dough.
- Divide Dough: Split the dough into 8 equal pieces for uniform bagels.
- Shape Bagels: Roll each piece into a rope shape, then bring the ends together and pinch to seal, forming traditional bagel rings. Place them on the prepared baking sheet.
- Apply Egg Wash & Top: Brush the tops of each bagel with the beaten egg mixed with milk for a glossy finish. Sprinkle remaining chocolate chips over the top for extra chocolate flavor and decoration.
- Bake: Bake in the preheated oven at 375°F for 20 to 22 minutes until the bagels are set and slightly firm to the touch.
- Serve Warm: Remove from the oven and serve warm, ideally with cream cheese or butter for a delicious complement.
- Enjoy: Savor your freshly baked double chocolate chip sourdough bagels as a decadent treat any time of the day.
Notes
- Use Greek yogurt plain or vanilla based on preference; vanilla adds slight sweetness.
- Self-rising flour can be homemade by combining 1 1/4 cups all-purpose flour with 1 1/2 tsp baking powder and 1/4 tsp salt if not using store-bought.
- Sourdough discard enhances flavor and texture but can be substituted with additional Greek yogurt if unavailable.
- If dough is too sticky, add flour gradually to avoid overly dry dough and preserve chewiness.
- For best results, use high-quality chocolate chips that melt well but hold shape.
- Store baked bagels in an airtight container for up to 2 days or freeze for longer storage.
- Prep Time: 15 minutes
- Cook Time: 22 minutes
- Category: Baking
- Method: Baking
- Cuisine: American
Keywords: double chocolate chip bagels, sourdough bagels, chocolate bagels, homemade bagels, sourdough discard recipes, baked bagels, breakfast bagels, chocolate chip bagels

